Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs55672909 chr11:1283512 A/G 6.66E-16 517 41.73 33.95 1.97 KM Plot
KIRC rs55774143 chr11:34806170 C/A 1.49E-7 522 40 38.47 3.3 KM Plot
KIRC rs55842132 chr22:25791192 A/G 0 513 39.7 42.82 0.73 KM Plot
KIRC rs55947894 chr11:34805390 C/T 1.49E-7 522 40 38.47 3.3 KM Plot
KIRC rs56052107 chr11:1284031 A/G 6.66E-16 517 41.73 33.95 1.97 KM Plot
KIRC rs56083806 chr20:48518217 C/T 6.12E-5 512 41.13 37.77 15.3 KM Plot
KIRC rs56099248 chr3:69857773 C/T 2.68E-5 518 39.47 44.3 30.9 KM Plot
KIRC rs56115421 chr11:34801589 T/C 1.49E-7 522 40 38.47 3.3 KM Plot
KIRC rs56195001 chr6:25976165 C/T 8.63E-9 510 41.13 36.87 3.37 KM Plot
KIRC rs56225362 chr11:1280362 T/C 7.77E-16 515 42.27 34.22 1.97 KM Plot
KIRC rs56240592 chr6:50815514 T/A 4.92E-6 520 40.5 40.6 15.3 KM Plot
KIRC rs56257756 chr11:1282194 C/G 6.66E-16 517 41.73 33.95 1.97 KM Plot
KIRC rs56294283 chr6:25976099 A/G 1.52E-8 511 41.27 36.95 2.38 KM Plot
KIRC rs56343276 chr6:2437492 A/C 1.57E-7 517 40 36.4 5.47 KM Plot
KIRC rs56361175 chr20:48526103 A/T 6.02E-5 516 41.27 37.6 15.3 KM Plot